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Micro-Manager: Old Version

Micro-Manager Version Archive

1.3 releases

Micro-Manager 1.3.45 (Feburary 4, 2010)

- Windows XP, 9 MB
- Mac OS X(Universal Binary), 34 MB
- Debian/Ubuntu Linux

This release of Micro-Manager is believed to be more stable than earlier beta versions. It includes a large number of improvements to stability, usability and error reporting, especially in the configuration and acquisition sections of the system.
  • Numerous bug fixes have been made throughout the application.
  • Improvements were made to the user interface in the Hardware Configuration Wizard.
  • Snap/Live window title now indicates current status.
  • An issue with the Zeiss M1 AxioImager has been resolved.
  • Changes were made to the Multi-Dimensional Acquisition:
    • Improvements to the MDA user interface
    • Better handling of auto-focus errors
    • Allow re-saving of acquired Image5D stacks.

Micro-Manager 1.3.43 (December 23, 2009)

- Windows XP, 9 MB
- Mac OS X(Universal Binary), 34 MB
  • Newly supported devices
    • SLM/Projector support
    • Andor Laser Combiner (not yet tested!)
    • Prior NanoScanZ
  • Improved Device Support
    • Nikon Eclipse Ti microscope now works with latest driver 2.0.2 from Nikon
    • Nikon Eclipse Ti microscope: user can now select Speed and Tolerance of stage axes
    • Nikon IntensiLight Neutral Density filters
    • DemoCam now supports color image generation
    • Update to Photometrics / Roper Scientific libraries (thanks to Photometrics)
    • Fix image freezing problem seen with Hamamatsu cameras
    • Improved Support for QImaging QCam (thanks to Jeff Kuhn)
    • Improved Support for Apogee Cameras (thanks to Bob Dougherty)
    • Zeiss Definite Focus improvements
  • Configuration, GUI, Log Level
    • Improved Plugin Mechanism
    • More informative error messages, better exception handling
    • Device Properties will now be nicely sorted in drop downs
    • Fixed a problem with saving current configuration when specifying a file name
    • Image Gamma slider control
    • Improved stability of Live Mode
    • Multi-D acquisition: Added per-channel skip Z-stack option
  • Build Projects & Procedures
    • OS X packages are now Universal (PPC, x86, x64) and can be run as 64-bit applications
    • The Windows Project files now use relative paths
    • Software is built daily for both Windows and OS X
    • Boost libraries are now used for logging, Posix time, and Thread ID functions

Micro-Manager 1.3.41 beta, (October 12, 2009)

- Windows XP, 9 MB
- Mac OS X(Intel), 18 MB
  • New supported devices
    • Scion cameras (Douglas Remsberg, Scion)
    • Diagnostic SPOT cameras (Windows, Mac)
    • TWAIN cameras (operational on Leica cameras)
    • Leica DM6000 microscope
    • Thorlabs DCxxxx LED controllers
    • Thorlabs Filterwheel
    • Coherent Cube
    • Neos AOTF
  • A new python wrapper for the Micro-Manager core
  • Fixes to keyboard shortcuts
  • Live display of average and standard deviation of images
  • Re-orderable positions lists
  • Many fixed bugs

Micro-Manager 1.3.40 beta, (July 21, 2009)

- Windows XP, 8 MB
- Mac OS X(Intel), 17 MB
  • Major upgrade to autofocus system
    • New integrated user interface for hardware and image-based autofocus
    • Support for Nikon Perfect Focus, Zeiss Definite Focus, Olympus ZDC, ASI CRIFF
    • Image-based autofocus plugins
    • New API to write your own autofocusing algorithm in Java or C++
  • Zeiss Colibri illuminator
  • Olympus BX61 support (by Shalin Mehta, National University of Singapore)
  • Andor linux patches (by Karl Bellve, UMass)
  • Thorlabs SC10
  • Improvements to configuration editing
  • Re-vamped gui for Multi-Dimensional Acquisition
  • Mouse-scroll-wheel works in scripting panel
  • NikonTI TIRF attachment support
  • Leica DMR microscope support

Previous releases

Micro-Manager 1.3.39 beta, (May 15, 2009)

- Windows XP, 8 MB
- Mac OS X(Intel), 16 MB
  • Fixed build bugs
  • Drag stage with hand tool
  • New Mad City Stage versions
  • Improved registration dialog
  • Float property value bug fixed
  • Position list made editable
  • Andor camera freezing snap bug fixed
  • MF Shutter issues fixed

Micro-Manager 1.3.38 beta, (April 29, 2009)

- Windows XP, 8 MB
- Mac OS X(Intel), 16 MB
- Debian package (maintained by Johan Henriksson)
  • New image-based autofocus (Contribued by 100x Imaging)
  • Extensive fixes to various PVCAM adapter bugs
  • Linux patches by Johan Henriksson and Karl Bellve
  • Improved code logging
  • Andor properties problem fixed
  • Image5D to hyperstack conversion improved
  • Adapters for NI, PI, and Thorlabs by Brian Ashcroft
  • Core API changes for multiple cameras

Micro-Manager 1.3.37 beta, (April 9, 2009)

- Windows XP, 8 MB
- Mac OS X(Intel), 16 MB
  • Fixed mouse moving the stage in live mode
  • Physical ROI now visible in Image5D Snap
  • Multi-D Acquisition settings a restored after a Multi-D run
  • Fixed z-offset problem with Multi-D Acq
  • Beanshell scripts for unit testing of device adapters
  • Fixed sensicam binning problem (Franz)
  • Metadata viewer now saves contrast and colors
  • Image5D window now acquires a name when saved
  • Improved Multi-D Acquisition gui logic

Micro-Manager 1.3.36 beta, (April 3, 2009)

- Windows XP, 8 MB
- Mac OS X(Intel), 16 MB
  • Olympus focusing (z stage) bug fixed
  • QCam Mac live mode hanging bug fixed
  • Fixed memory leaks in Multi-D Acquisition
  • Pixel size calibration fixed to propagate from Multi-D Acquisition
  • Quantix Photometrics Error 22 bug corrected
  • Introduced new global script methods: doc(), inspect(), update()
  • ASI Well Plate Transfer Robot adapter added
  • Internationalization bug fix
  • Histogram scaling restored

Micro-Manager 1.3.34 beta, (March 18, 2009)

- Windows XP, 5.4 MB
  • PrecisExcite bug fix

Micro-Manager 1.3.33 beta, (March 16, 2009)

- Windows XP, 5.4 MB
- Mac OS X(Intel), 14.9 MB
  • PrecisExcite adapter
  • Made OS X 10.4 compatible again

Micro-Manager 1.3.32 beta, (March 13, 2009)

- Mac OS X(Intel), 14.9 MB

Micro-Manager 1.3.31 beta, (March 11, 2009)

- Windows XP, 5.4 MB
- Mac OS X(PPC), 26 MB

Micro-Manager 1.3.30 beta, (March 4, 2009)

- Windows XP, 5.4 MB
- Mac OS X(Intel), 14.9 MB

Bugs are seen in some PVCAM cameras in this release:
  • Auto shutter fails to stay open during exposure
  • Burst mode sometimes stops unexpectedly
Bug fixes in this release:
  • Andor adapter: fixes to make Luca R work
  • PCO adapter: fixed bug in binning (Franz)
  • Olympus adapter: various bug fixes
  • Leica: added control for Halogen Lamp (Prashanth, 100xImaging)
  • PVCAM: various bug fixes (various authors)

Micro-Manager 1.3.24 beta, (February 24, 2009)

- Mac OS X(Intel), 14.9 MB
  • Corrected driver complement

Micro-Manager 1.3.23 beta, (February 17, 2009)

- Windows XP, 5.4 MB

Micro-Manager 1.3.22 beta, (February 13, 2009)

- Mac OS X(Intel), 14.1 MB (Missing drivers; do not use!)
- Mac OS X(PPC), 26 MB


This new release includes:
  • Faster live mode (using camera sequence mode, in collaboration with 100XImaging)
  • New Micro-Manager plugin mechanism (provided by 100XImaging)
  • Keratocyte Tracker plugin (provided by 100XImaging)
  • New "Acquire" button collects series of still images with metadata
  • Keyboard commands to move stages
  • New autofocussing mechanism (provided by 100XImaging)
  • Improved Script Panel (new interactive Beanshell interpreter)
  • Extensions to the scripting interface
  • Many minor bugfixes in all parts of the application
  • New Devices:
  • Device updates:
    • Andor added external triggers and updated support for new cameras
    • Nikon TE2000 added filter wheel (100X Imaging)
    • Moved DAZStage, DAShutter and MultiShutter into adapter Utilities
    • Added StateDeviceShutter (in Utilities) that enables using a filter wheel as a shutter
Previous releases: [ Windows | Mac ]
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